Project information
Visualization of protein structures
- Project Identification
- GA201/07/0927
- Project Period
- 1/2007 - 12/2009
- Investor / Pogramme / Project type
-
Czech Science Foundation
- Standard Projects
- MU Faculty or unit
- Faculty of Informatics
- Other MU Faculty/Unit
- Faculty of Science
- Keywords
- virtual reality, protein visualization, interaction techniques, molecular dynamics
Project is focused on research of the methods for visualization of proteins.
Publications
Total number of publications: 23
2009
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HotSpot Wizard: a Web Server for Identification of Hot Spots in Protein Engineering.
NUCLEIC ACIDS RESEARCH, year: 2009, volume: 2009, edition: 37
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Pathways and Mechanisms for Product Release in the Engineered Haloalkane Dehalogenases Explored using Classical and Random Acceleration Molecular Dynamics Simulations.
JOURNAL OF MOLECULAR BIOLOGY, year: 2009, volume: 2009, edition: 00
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Quantitative Analyses of Substrate Specifity of Haloalkane Dehalogenase
Year: 2009, type: R&D Presentation
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Redesigning Dehalogenase Access Tunnels as a Strategy for Degrading an Anthropogenic Substrate.
NATURE CHEMICAL BIOLOGY, year: 2009, volume: 0000, edition: 5
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Studium dynamiky molekul vody v ústí tunelu haloalkándehalogenáz
Year: 2009, type: R&D Presentation
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Study of water molecule dynamics at the tunnel openings of haloalkane dehalogenase
Year: 2009, type: R&D Presentation
2008
-
CAVER 2.0
Year: 2008
-
Computation of more channels in protein molecules
Proceedings of Visual Computing for Biomedicine, year: 2008
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Fast Method for Computation of Channels in Dynamic Proteins
Vision, Modeling and Visualization 2008, Proceedings, year: 2008
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HOTSPOT WIZARD 1.0
Year: 2008