Acquiarium 2009

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This publication doesn't include Faculty of Sports Studies. It includes Faculty of Informatics. Official publication website can be found on muni.cz.
Authors

MATULA Pavel MAŠKA Martin DANĚK Ondřej VINKLER Marek

Year of publication 2009
MU Faculty or unit

Faculty of Informatics

Web http://cbia.fi.muni.cz/acquiarium/
Description Acquiarium is free software for solving the common pipeline of many spatial cell studies using fluorescence microscopy. It addresses image capture, raw image correction, image segmentation, quantification of segmented objects and their spatial arrangement, volume rendering, and statistical evaluation. The software is designed for processing of a collection of many 3D images. It can be used for analysis of a collection of 2D images or time lapse series of 2D or 3D images as well. It has a modular design and is extensible via plug-ins. The main improvements in the year 2009 are described on http://cbia.fi.muni.cz/projects/acquiarium-versions.html
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