CICADA: Parallelization and Related Problems

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Authors

KOSINA Aleš KŘÍŽ Zdeněk KOČA Jaroslav

Year of publication 2005
Type Article in Proceedings
Conference Workshop on Modeling Interactions in Biomolecules II
MU Faculty or unit

Faculty of Science

Citation
Field Biochemistry
Keywords Single Coordinate Driving; Parallelization; Conformational Analysis; result verification
Description CICADA programme is based on SCD (Single Coordinate Driving) approach and is used for a comformational analysis and molecular docing of small and middle sized molecules. CICADA programme was parallelized in Master-Slave approach. The programme were extensively tested for the correctness on different computer environment and is showen result independece on number of CPU and eviroment.
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