Subunit Folds and Maturation Pathway of a dsRNA Virus Capsid

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Authors

NĚMEČEK Daniel BOURA Evžen WU Weimin CHENG Naiqian PLEVKA Pavel QIAO Jian MINDICH Leonard HEYMANN J Bernard HURLEY James H STEVEN Alasdair C

Year of publication 2013
Type Article in Periodical
Magazine / Source Structure
MU Faculty or unit

Central European Institute of Technology

Citation
Web http://www.ncbi.nlm.nih.gov/pubmed/23891288
Doi http://dx.doi.org/10.1016/j.str.2013.06.007
Field Microbiology, virology
Keywords Bacteriophage phi6; Cystoviridae; cryo-electron microscopy; capsid structure; capsid expansion; segmented genome; conformational change; RNA packaging
Description The cystovirus phi 6 shares several distinct features with other double-stranded RNA (dsRNA) viruses, including the human pathogen, rotavirus: segmented genomes, nonequivalent packing of 120 subunits in its icosahedral capsid, and capsids as compartments for transcription and replication. phi 6 assembles as a dodecahedral procapsid that undergoes major conformational changes as it matures into the spherical capsid. We determined the crystal structure of the capsid protein, P1, revealing a flattened trapezoid subunit with an alpha-helical fold. We also solved the procapsid with cryo-electron microscopy to comparable resolution. Fitting the crystal structure into the procapsid disclosed substantial conformational differences between the two P1 conformers. Maturation via two intermediate states involves remodeling on a similar scale, besides huge rigid-body rotations. The capsid structure and its stepwise maturation that is coupled to sequential packaging of three RNA segments sets the cystoviruses apart from other dsRNA viruses as a dynamic molecular machine.
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