Qualitative modelling and analysis of Photosystem II

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Authors

BRIM Luboš DĚD Vilém ŠAFRÁNEK David

Year of publication 2013
Type Article in Proceedings
Conference CEUR Workshop Proceedings
MU Faculty or unit

Faculty of Informatics

Citation
Web http://ceur-ws.org/Vol-988/paper3.pdf
Field Informatics
Keywords Qualitative modelling; Petri nets; Systems biology; Photosystem II; Model checking
Description In this paper, a work-in-progress aiming at qualitative modelling of photosynthesis at the mechanistic cellular level by means of Petri nets is described. Presented preliminary results concentrate on modelling and analysis of photosystem II, a crucial component of photosynthesis. By employing qualitative model checking combined with invariant analysis we obtain new insights into electron transfer mechanisms studied in photosystem II.
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